Regulatory

Part:BBa_M33351:Design

Designed by: Sunny Kim   Group: Stanford BIOE44 - S010   (2010-06-06)

Ptod promoter activated by TodT protein


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


Design Notes

We added restriction digestion sites to ensure compliance with Assembly Standard 10.

Source

The sequence of the Ptod promoter was given in the article referenced below. This identicle sequence was found upstream of the todX gene sequence natural existent in Pseudomonas putida given in http://www.ncbi.nlm.nih.gov/nuccore/AB042508.1 (todX coordinates: 14325..15686).

References

Lacal, J., Guazzaroni, M. E., Busch, A., Krell, T. & Ramos, J. L. (2008). Hierarchical binding of the TodT response regulator to its multiple recognition sites at the tod pathway operon promoter. J. Mol. Biol. 376, 325–337.